Installation
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- Step 1: Installation
- Installation notes
- Step 2: Configuration and set up
- Step 2c: Starting up
Rserve
- Windows set-up
- Step 2c: Starting up
To install Git without using Xcode, you can use Homebrew (which is great for installing other tools as well) - it comes highly recommended. I prefer using Homebrew over the dedicated download and install options like you used for Git. Mar 19, 2013 Install the Command Line Tools for OS X Xcode is a nearly 4GB developer suite Apple offers for free from the Mac App Store. However, for the purposes of getting Git and Github setup, you'll only need a specific set of command line tools 2 which fortunately take up much less space. If you don't mind the 4GB, by all means go for Xcode. Click Install Xcode if you plan to developer OS X or iOS software, if you want a hassle-free experience then click Install to get the Apple version of Git. Click Agree to the license agreement. Once successfully compiled you need to install the build on the terminal since the standard target location of the files need root privileges. So change directory to your osg, simgear or flightgear git directory containing the.xcodeproj file and execute the command 'sudo xcodebuild -target install -configuration Release'.
Requirements
Before installing Glotaran, please check to see if your system meets thespecified requirements.
Step 1: Installation
Glotaran can be downloaded from github.Note that there are different installers for each operating system (Windows, Mac OS X, Linux). Alternatively, a system independent zip distribution is alsoavailable which runs on any platform that has Java SE 8 installed.
Installation notes
Windows installation
Under newer versions of Windows it might not always be possible to installGlotaran in the 'Programs' or 'Program Files' folder without havingelevated administrator rights. However, Glotaran can also safely beinstalled in for instance the Documents folder. Alternatively you cansafely run the System Independent Zip distribution directly from yourDownloads or Documents folder.
Linux installation
It might be necessary to make the installer executable. This can be doneby issues the command chmod +x
from the command line, or - depending on the Desktop Environment - rightclicking the installer and selecting 'executable' from the propertiesdialog.
Mac OS X installation
Download the Glotaran Disk Image (dmg) from the website and open it.Then drag the Glotaran application to your application folder asnormally.
Step 2: Configuration and set up
To make use of all of the functionality in Glotaran requires a workinginstallation of R on the machine, with the R packages TIMP
and Rserve
installed.Otherwise you will not be able to run any new analysis, and only view existing results (such as the included demo project).
If you have not yet installed R
, please refer to the official R-projectwebsite for instructions and install R
, before proceeding with these notes.
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Once R
has been installed it is important to install the R packagesTIMP
and Rserve from CRAN from CRAN or alternatively rforge.net.
If needed, refer to the detailed instructions below.
Step 2a: Installing the R package TIMP
To install the R package TIMP
, please take the following steps:
- Start R; either from the command line or start the R GUI
- Execute the following command:
install.packages('TIMP')
Please note that TIMP
version 1.13 or higher is required for Glotaran1.5 and higher to run. The above command automatically install thelatest stable version of TIMP.
Step 2b: Installing the R package Rserve
To install the R package Rserve, please take the following steps:
- Start R; either from the command line or start the R GUI
- Execute the following command:
install.packages('Rserve')
Step 2c: Starting up Rserve
Windows set-up
Method 1: StartingRserve
from the R
GUI Other than the method described above, there is another way to startRserve - from within the R GUI.
To start Rserve from the R GUI
- Start the 32-bit version of R (R i386; either from the command line or start the App)
- Execute the following commands:
library(Rserve)
- and one of the following:
Rserve()
(for Windows and Linux/Unix)Rserve(args='--no-save')
(for Mac OS X)Rserve(args='--no-save', debug=TRUE)
(if you run into issues)
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Method 2: Starting Rserve from the command lineThis method may provide more diagnostic information when errors occur.Find the R installation location. Under Windows this istypically:
C:Program FilesRR-x.y.z
Please note that TIMP
version 1.13 or higher is required for Glotaran1.5 and higher to run. The above command automatically install thelatest stable version of TIMP.
Step 2b: Installing the R package Rserve
To install the R package Rserve, please take the following steps:
- Start R; either from the command line or start the R GUI
- Execute the following command:
install.packages('Rserve')
Step 2c: Starting up Rserve
Windows set-up
Method 1: StartingRserve
from the R
GUI Other than the method described above, there is another way to startRserve - from within the R GUI.
To start Rserve from the R GUI
- Start the 32-bit version of R (R i386; either from the command line or start the App)
- Execute the following commands:
library(Rserve)
- and one of the following:
Rserve()
(for Windows and Linux/Unix)Rserve(args='--no-save')
(for Mac OS X)Rserve(args='--no-save', debug=TRUE)
(if you run into issues)
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Method 2: Starting Rserve from the command lineThis method may provide more diagnostic information when errors occur.Find the R installation location. Under Windows this istypically:
C:Program FilesRR-x.y.z
Next, locate the R library folder Does seagate work with mac. where the packages Rserve and TIMP havebeen installed in. Under Windows this is typically:
C:Program FilesRR-x.y.zlibrary
(if you installed as administrator or with elevated rights)%USERPROFILE%Rwin-libraryx.y
(otherwise)
Inside the R library folder navigate to the Rserve subfolder.
Mac pro operating system versions. From the libsi386
folder copy the following files from here:
Rserve.exe
Rserve_d.exe
To the i386 folder inside the bin folder of the R installation location, e.g.:
C:Program FilesRR-x.y.zbini386
Note: depending on Windows settings you mightnot see the .exe extension (how to change that).
Now run the Rserve executable you just copied to the i386/bin folder from there, to see if it works. If you see a (Windows) Firewall dialog, please unblock the program. Rserve will not work otherwise.
Note you might want to make a shortcut to the Rserve.exe executable outit on your desktop so you can start it before you start Glotaran.
Linux and Max OS X set-up
Linux and Mac OS X require no special steps to setup. Start R (preferably from a terminal) and refer to method 1
Step 3: Starting Glotaran
Now you can start Glotaran from your application menu. Or,alternatively, you can start Glotaran using the glotaran executable inthe bin sub folder of the Glotaran installation or zip folder.
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You can also start Glotaran without starting Rserve first, but then youwill not be able to run any new analysis, and only view existing results(such as the included demo project).
Step 4: Updating
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This version of Glotaran is no longer actively maintained or updated, hence its rebranding to glotaran-legacy. However, if a new version is released you can find it on github.